unisets 0.99.0
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Reference

All functions

FuzzyHits()

FuzzyHits Class

membership() `membership<-`()

Methods for FuzzyHits Objects

FuzzySets()

FuzzySets Class

membership(<FuzzySets>) `membership<-`(<FuzzySets>) as.matrix(<FuzzySets>) as.FuzzySets.matrix()

Methods for FuzzySets Objects

GOEvidenceCodes GOOntologyCodes GOHits()

GOHits Class

ontology() `ontology<-`() evidence() `evidence<-`()

Methods for GOHits Objects

GOSets()

GOSets Class

evidence(<GOSets>) `evidence<-`(<GOSets>) ontology(<GOSets>) `ontology<-`(<GOSets>)

Methods for GOSets Objects

IdVector() EntrezIdVector() EnsemblIdVector() GOIdVector()

IdVector Class

`ids<-`() ids(<IdVector>) names(<IdVector>) `names<-`(<IdVector>,<ANY>) length(<IdVector>) duplicated(<IdVector>) `[`(<IdVector>,<ANY>,<ANY>,<ANY>) as.vector(<IdVector>) as.character(<IdVector>) as.IdVector.default()

Methods for IdVector objects

Sets()

Sets Class

relations() `relations<-`() elements() elementInfo() `elementInfo<-`() sets() setInfo() `setInfo<-`() nElements() nSets() setLengths() elementLengths() length(<Sets>) c(<Sets>) `[`(<Sets>,<ANY>,<ANY>,<ANY>) subset(<Sets>) duplicated(<Sets>) unique(<Sets>) union.Sets() as.DataFrame.Sets() as.data.frame(<Sets>) as.list(<Sets>) as.matrix(<Sets>) as.Sets.list() as.Sets.matrix()

Methods for Sets Objects

GMTFile() import.gmt() import(<GMTFile>,<ANY>,<ANY>) export.gmt() export(<Sets>,<GMTFile>,<ANY>) import.Go3AnnDbBimap() import(<Go3AnnDbBimap>,<ANY>,<ANY>)

Import and export

Contents

Developed by Kevin Rue-Albrecht, Robert Amezquita.

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