Teaching
This page details my teaching experience. For a summary, please see the Teaching Experience section of my CV.
2025
Nov 2025
Introduction to single-cell RNAseq data analysis using R
Five (of six) days of hands-on training covering single-cell analysis using Seurat and Bioconductor (12 participants).
Oct 2025
R for data science and genomics
Nine days of hands-on training covering R programming, data science principles, and genomic data analysis (11 participants).
Sep 2025 -
Oct 2025
Genomics on the Linux command line
Five days of hands-on training covering Linux command line tools for genomic data analysis (11 participants).
Sep 2025
iSEE therefore I explore (better)
European Bioconductor Conference 2025 (Barcelona, Spain)
Contributed to the organisation and delivery of a 1h45min workshop covering interactive visualisation of omics data using the iSEE package.
Sep 2025
Orchestrating Large-Scale Single-Cell Analysis with Bioconductor
European Bioconductor Conference 2025 (Barcelona, Spain)
Two days of hands-on training covering the Bioconductor ecosystem for single-cell RNA-seq analysis (21 participants).
Jul 2025
Spatial Transcriptomics data analysis using R
Four days of hands-on training covering spatial transcriptomics data analysis (12 participants).
Jun 2025
Introduction to single-cell RNAseq data analysis using R
Six days of hands-on training covering single-cell analysis using Seurat and Bioconductor (12 participants).
May 2025
R for data science and genomics
Nine days of hands-on training covering R programming, data science principles, and genomic data analysis (12 participants).
May 2025
Genomics on the Linux command line
Five days of hands-on training covering Linux command line tools for genomic data analysis (12 participants).
Apr 2025
MSc in Precision Cancer Medicine
Department of Oncology (University of Oxford)
Two online tutorials (13 participants).
Feb 2025
Introduction to single-cell RNAseq data analysis using Python
Five days of hands-on training covering single-cell RNAseq data analysis using Python (12 participants).
Jan 2025
Python programming and data science
Six days of hands-on training covering Python programming and data science principles (7 participants).
Jan 2025
Genomics on the Linux command line
Five days of hands-on training covering Linux command line tools for genomic data analysis (9 participants).
2024
Dec 2024
Containers for Reproducible Research
One-day of hands-on training covering containerization technologies (e.g., Apptainer) for reproducible research (8 participants).
Nov 2024
Introduction to single-cell RNAseq data analysis using R
Six days of hands-on training covering single-cell analysis using Seurat and Bioconductor (11 participants).
Oct 2024
R for data science and genomics
Nine days of hands-on training covering R programming, data science principles, and genomic data analysis (14 participants).
Sep 2024 -
Oct 2024
Genomics on the Linux command line
Five days of hands-on training covering Linux command line tools for genomic data analysis (13 participants).
Sep 2024
Spatial Transcriptomics Data Camp
Five days of hands-on training covering spatial transcriptomics data analysis (25 participants).
Sep 2024
Navigating and expanding the iSEE universe
European Bioconductor Conference, Oxford (Oxford, UK)
Co-organised and delivered a 40min workshop covering interactive visualisation of omics data using the iSEE package.
Jun 2024
Introduction to single-cell RNAseq data analysis using R
Five (of six) days of hands-on training covering single-cell analysis using Seurat and Bioconductor (13 participants).
May 2024
R for data science and genomics
Nine days of hands-on training covering R programming, data science principles, and genomic data analysis (10 participants).
May 2024
Version control using Git and GitHub
One-day lesson of hands-on training covering version control using Git and GitHub as part of the ’Genomics on the Linux command line (11 participants).
Apr 2024
MSc in Precision Cancer Medicine
Department of Oncology (University of Oxford)
Two online tutorials (14 participants).
Mar 2024
Introduction to single-cell RNAseq data analysis using R
Five (of six) days of hands-on training covering single-cell analysis using Seurat and Bioconductor (10 participants).
Feb 2024-
Mar 2024
R for data science and genomics
Nine days of hands-on training covering R programming, data science principles, and genomic data analysis (13 participants).
Feb 2024
Version control using Git and GitHub
One-day lesson of hands-on training covering version control using Git and GitHub as part of the ’Genomics on the Linux command line (11 participants).
2023
Oct 2023
Introduction to single-cell RNAseq data analysis using R
Five (of six) days of hands-on training covering single-cell analysis using Seurat and Bioconductor (12 participants).
Sep 2023-
Oct 2023
R for data science and genomics
Nine days of hands-on training covering R programming, data science principles, and genomic data analysis (13 participants).
Sep 2023
Version control using Git and GitHub
One-day lesson of hands-on training covering version control using Git and GitHub as part of the ’Genomics on the Linux command line (13 participants).
Sep 2023
iSEEing is believing: the iSEE package for efficient, interactive, and reproducible exploration of data
European Bioconductor Conference 2023 (Ghent, Belgium)
Contributed to the organisation of a 40min workshop covering interactive visualisation of omics data using the iSEE package.
Jun 2023
Introduction to single-cell RNAseq data analysis using R
Three (of six) days of hands-on training covering single-cell analysis using Seurat and Bioconductor (12 participants).
Jun 2023
R for data science and genomics
Eight (of ten) days of hands-on training covering R programming, data science principles, and genomic data analysis (12 participants).
Apr 2023
Genomics on the Linux command line
Two (of five) days of hands-on training covering Linux command line tools for genomic data analysis (12 participants).
Apr 2023
MSc in Precision Cancer Medicine
Department of Oncology (University of Oxford)
Two online tutorials (8 participants).
Feb 2023
Introduction to single-cell RNAseq data analysis using R
Three (of five) days of hands-on training covering single-cell analysis using Seurat and Bioconductor (12 participants).
Jan 2023-
Feb 2023
R for data science and genomics
Ten days of hands-on training covering R programming, data science principles, and genomic data analysis (12 participants).
Jan 2023
Version control using Git and GitHub
One-day lesson of hands-on training covering version control using Git and GitHub as part of the ’Genomics on the Linux command line (10 participants).
2022
Oct 2022
Introduction to single-cell RNAseq data analysis using R
Five days of hands-on training covering single-cell analysis using Seurat and Bioconductor (12 participants).
Oct 2022
R for data science and genomics
Eight (of ten) days of hands-on training covering R programming, data science principles, and genomic data analysis (12 participants).
Sep 2022
Version control using Git and GitHub
One-day lesson of hands-on training covering version control using Git and GitHub as part of the ‘Python programming and data science’ curriculum (12 participants).
Sep 2022
Genomics on the Linux command line
Four days of hands-on training covering Linux command line tools for genomic data analysis (12 participants).
May 2022
Oxford Biomedical Data Science (OBDS) Training Programme
Fifteen (of thirty) days of hands-on training covering Linux and R programming for genomic and single-cell data analysis (8 participants).
Apr 2022
MSc in Precision Cancer Medicine
Department of Oncology (University of Oxford)
Three online tutorials (8 participants).
Jan 2022-
Feb 2022
Oxford Biomedical Data Science (OBDS) Training Programme
Fifteen (of thirty) days of hands-on training covering Linux and R programming for genomic and single-cell data analysis (8 participants).
2021
Sep 2021-
Oct 2021
Oxford Biomedical Data Science (OBDS) Training Programme
Fifteen (of thirty) days of hands-on training covering Linux and R programming for genomic and single-cell data analysis (8 participants).
May 2021-
Jun 2021
Oxford Biomedical Data Science (OBDS) Training Programme
Thirteen (of thirty) days of hands-on training covering Linux, Python, and R programming for genomic and single-cell data analysis (8 participants).
Jan 2021-
Feb 2021
Oxford Biomedical Data Science (OBDS) Training Programme
Thirteen (of thirty) days of hands-on training covering Linux, Python, and R programming for genomic and single-cell data analysis (8 participants).
2020
Sep 2020-
Oct 2020
Oxford Biomedical Data Science (OBDS) Training Programme
Sixteen (of thirty) days of hands-on training covering Linux, Python, and R programming for genomic and single-cell data analysis (8 participants).
Jul 2020
Interactive visualization of SummarizedExperiment objects with iSEE
Bioconductor Conference 2020 (Online)
Co-organised and delivered a 55min online workshop covering interactive visualisation of omics data using the iSEE package.
Jun 2020
iSEE: Interactive visualization of SummarizedExperiment objects
SIB Days (Online)
Co-organised and delivered a 2h30 online workshop covering interactive visualisation of omics data using the iSEE package..
Apr 2020-
Jun 2020
Oxford Biomedical Data Science (OBDS) Training Programme
Thirty days of hands-on training covering Linux, Python, and R programming for genomic and single-cell data analysis (8 participants).