| GOexpress |
Methods to visualise the expression profile of genes from transcriptomics experiments, and offers a supervised clustering approach to identify GO terms containing genes with expression levels that best classify two or more predefined groups of samples. |
| iSEE |
Functions for creating an interactive graphical user interface based on RStudio Shiny for exploring data stored in SummarizedExperiment objects. Particular attention is given to visualization of dimensionality reduction results in SingleCellExperiment objects. |
| iSEEu |
The iSEE universe contains diverse functionality to extend the usage of the iSEE package, including additional classes for the panels, or modes allowing easy configuration of iSEE applications. |
| TVTB |
Methods to filter, summarise and visualise genetic variation data stored in VCF files. |